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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15192532_15195233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15192532 - 15195233

Intron Length:

2702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTCTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TATGAACAAACT

Flanking Amino Acid:

SQIVSAVKHMHENNIIHRDL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

77.9

0.69

0.8

75.9

Major PPT

81.5

0.71

0.8

76.5

32.3

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

-0.6

2.3

64.3

45.2

Associated Gene:

Gene:

NIM1K

Ensembl Gene ID:

ENSAPLG00000015565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016220

15179370 - 15196272

16903