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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15200000_15200521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15200000 - 15200521

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

MKIRQETHHLANYIPQCSVE

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.5

0.96

0.7

88.4

28.6

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

HMGCS1

Ensembl Gene ID:

ENSAPLG00000000587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035794

15199326 - 15206321

6996

ENSAPLT00000000985

15185308 - 15204542

19235