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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15201098_15201810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15201098 - 15201810

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GTTTGGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TAATTCTCAGCA

Flanking Amino Acid:

VYGCLASLLAQYSPEHLAGQ

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

78.2

0.7

77.9

32.1

Major PPT

79.8

0.67

72.9

42.2

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

53.3

0.1

1.8

65.81

40.2

Associated Gene:

Gene:

HMGCS1

Ensembl Gene ID:

ENSAPLG00000000587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035794

15199326 - 15206321

6996

ENSAPLT00000000985

15185308 - 15204542

19235