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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15202282_15202971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15202282 - 15202971

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTAGC

5'SS Class:

major

3'SS Sequence:

CTGCCAATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGTGTTACAACT

Flanking Amino Acid:

RNKIHAQWQKEGTDRRFTLN

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.8

42.3

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

69.4

0.44

40.8

Minor 5ss

41.7

-0.9

2.5

45.6

42.8

Minor BPS

47.6

-0.1

1.9

69.31

41.7

Associated Gene:

Gene:

HMGCS1

Ensembl Gene ID:

ENSAPLG00000000587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035794

15199326 - 15206321

6996

ENSAPLT00000000985

15185308 - 15204542

19235