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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15203137_15203638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15203137 - 15203638

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TAATTTTCAATG

Flanking Amino Acid:

GPNAPLIFERGLRGTHMQHA

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.9

0.65

0.8

78.6

28.7

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

53.6

-0

1.5

57.09

38.9

Associated Gene:

Gene:

HMGCS1

Ensembl Gene ID:

ENSAPLG00000000587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035794

15199326 - 15206321

6996

ENSAPLT00000000985

15185308 - 15204542

19235