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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15204553_15205355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15204553 - 15205355

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGGGAC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTCCTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

56.5

36.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

78.7

27.5

Minor 5ss

26.1

-2.8

3.5

32.4

42.7

Minor BPS

76.7

0.7

1.5

76.73

40.6

Associated Gene:

Gene:

HMGCS1

Ensembl Gene ID:

ENSAPLG00000000587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035794

15199326 - 15206321

6996