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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15254439_15254656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15254439 - 15254656

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAACTTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AAATTCTTAATA

Flanking Amino Acid:

SISSIITQATKMLLYCYKTK

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

77.7

33.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

49.1

-0.1

2.6

66.9

38.4

Minor BPS

72.2

0.69

1.1

71.64

33.9

Associated Gene:

Gene:

C5orf34

Ensembl Gene ID:

ENSAPLG00000001554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001582

15249711 - 15262822

13112