Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15261430_15261587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15261430 - 15261587

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGGC

5'SS Class:

major

3'SS Sequence:

CGTCTTTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TCGTCTTTAATT

Flanking Amino Acid:

RVAFVLSAHREQVARALHFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

62.9

42.9

Major BPS

74.7

0.61

65.9

40.9

Major PPT

66.6

0.38

38.3

Minor 5ss

31.5

-2.1

3.3

34.9

41.5

Minor BPS

77.6

0.94

1.1

83.09

39.1

Associated Gene:

Gene:

C5orf34

Ensembl Gene ID:

ENSAPLG00000001554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001582

15249711 - 15262822

13112