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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15266709_15268821_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15266709 - 15268821

Intron Length:

2113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

GTGTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

ATGTACTTAATC

Flanking Amino Acid:

NGTDLPGADYLYFDDIDDEM

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

73.8

37.3

Major BPS

82.6

0.81

0.8

71.7

Major PPT

81.4

0.71

0.8

77.2

37.1

Minor 5ss

0.61

2.2

85.2

31.6

Minor BPS

69.6

0.6

1.5

73.82

Associated Gene:

Gene:

PAIP1

Ensembl Gene ID:

ENSAPLG00000001947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043449

15266342 - 15287414

21073

ENSAPLT00000024002

15264219 - 15286567

22349

ENSAPLT00000001986

15264886 - 15288385

23500