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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15285424_15286353_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15285424 - 15286353

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

AAACACTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATAAACA

Flanking Amino Acid:

KTAAPGSGGAEHLQQTRIPF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

84.4

0.85

34.5

Major PPT

68.2

0.41

62.8

42.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

0.03

2.1

70.69

40.9

Associated Gene:

Gene:

PAIP1

Ensembl Gene ID:

ENSAPLG00000001947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043449

15266342 - 15287414

21073

ENSAPLT00000032507

15268138 - 15286567

18430

ENSAPLT00000024002

15264219 - 15286567

22349