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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15299996_15300725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15299996 - 15300725

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTATGCTCAAAG

Flanking Amino Acid:

TAAGKVPPAKVLIIGGGVAG

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

67.6

0.4

58.1

47.3

Minor 5ss

-1.9

3.1

41.6

Minor BPS

49.4

-0.1

2.1

62.15

45.1

Associated Gene:

Gene:

NNT

Ensembl Gene ID:

ENSAPLG00000002368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040116

15290545 - 15331400

40856

ENSAPLT00000002474

15290545 - 15329243

38699