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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15300815_15302366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15300815 - 15302366

Intron Length:

1552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

CACCCCTCAATT

Flanking Amino Acid:

MGAVVRGFDTRAAALEQFKS

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

84.7

0.78

0.7

30.8

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

0.27

1.6

66.86

43.9

Associated Gene:

Gene:

NNT

Ensembl Gene ID:

ENSAPLG00000002368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040116

15290545 - 15331400

40856

ENSAPLT00000002474

15290545 - 15329243

38699