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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15309052_15310064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15309052 - 15310064

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATATTCTTATCC

Flanking Amino Acid:

ALNGGYSIEQMMYLGSGLCC

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.1

0.61

77.9

34.4

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

66.4

0.49

1.6

73.35

37.3

Associated Gene:

Gene:

NNT

Ensembl Gene ID:

ENSAPLG00000002368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040116

15290545 - 15331400

40856

ENSAPLT00000002474

15290545 - 15329243

38699