Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15319726_15328489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15319726 - 15328489

Intron Length:

8764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TACTTACTAATA

Flanking Amino Acid:

KMLREQGKNVRFGIHPVAGR

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

83.3

0.75

0.7

81.7

29.5

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

48.6

-0.1

1.9

61.97

38.2

Associated Gene:

Gene:

NNT

Ensembl Gene ID:

ENSAPLG00000002368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040116

15290545 - 15331400

40856

ENSAPLT00000002474

15290545 - 15329243

38699