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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15512219_15569951_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
15512219 - 15569951

Intron Length:
57733

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTACG

5'SS Class:
major

3'SS Sequence:
TTTTTATTTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
GATTTTTTATTT

Flanking Amino Acid:
SGTKKENCPFSILEITSVEI

Intron Amino Acid Position:
113

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1
69.4
41.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
90.2
0.9
0.6
89.7
25.5

Minor 5ss
38.2
-1.3
2.7
49.6
40.1

Minor BPS
59.5
0.38
1.5
73.06
38.4

Associated Gene:

Gene:
FGF10

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15505982 - 15570689
64708

15507708 - 15570689
62982