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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_15979687_16002362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15979687 - 16002362

Intron Length:

22676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCA

Flanking Amino Acid:

LNELNDPLREEIVNFNCRKL

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.7

0.58

0.8

74.2

29.9

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

65.1

0.47

1.5

74.19

38.2

Associated Gene:

Gene:

HCN1

Ensembl Gene ID:

ENSAPLG00000011715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012208

15961294 - 16161203

199910