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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1606292_1606761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1606292 - 1606761

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

ACCGTCTAAGCC

Flanking Amino Acid:

PDNKETEMPTVMHQNFPVSQ

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

34.2

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

86.2

0.81

0.6

81.9

22.9

Minor 5ss

41.9

-0.9

2.7

42.2

Minor BPS

43.2

-0.5

1.9

47.19

42.9

Associated Gene:

Gene:

UBAP1

Ensembl Gene ID:

ENSAPLG00000007234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007506

1601723 - 1633766

32044

ENSAPLT00000047874

1601723 - 1631370

29648

ENSAPLT00000037668

1601723 - 1633766

32044

ENSAPLT00000037105

1601723 - 1633766

32044