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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1606292_1610235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1606292 - 1610235

Intron Length:

3944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAACGCG

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

ACCGTCTAAGCC

Flanking Amino Acid:

EESSPSTVTTVMHQNFPVSQ

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

54.3

43.1

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

86.2

0.81

0.6

81.9

22.9

Minor 5ss

36.5

-1.5

3.4

48.2

47.5

Minor BPS

43.2

-0.5

1.9

47.19

42.9

Associated Gene:

Gene:

UBAP1

Ensembl Gene ID:

ENSAPLG00000007234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048022

1601723 - 1633766

32044