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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_16261221_16266026_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16261221 - 16266026

Intron Length:

4806

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCATGCTGC

5'SS Class:

major

3'SS Sequence:

AATGATGGAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TTAATCAAAACT

Flanking Amino Acid:

NHGYGTYVRIDNVCTTVQTI

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

55.3

Major BPS

71.2

0.53

72.3

32.8

Major PPT

45.8

-0.2

1.2

38.2

42.6

Minor 5ss

40.1

-1.1

55.5

44.3

Minor BPS

49.8

0.07

74.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002121

16260997 - 16266666

5670