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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_16307740_16308517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16307740 - 16308517

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TCTGTTTTACCT

Flanking Amino Acid:

IYSKRREKCAEIEKEFDQTE

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

0.72

78.4

31.2

Major PPT

77.6

0.62

0.9

72.7

36.6

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

57.3

0.31

1.7

74.22

43.6

Associated Gene:

Gene:

EMB

Ensembl Gene ID:

ENSAPLG00000015050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015704

16303478 - 16326138

22661