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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_16415099_16422106_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
16415099 - 16422106
Intron Length:
7008

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTATGTATT
5'SS Class:
strong_major
3'SS Sequence:
ATTGTTTTGGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATAAAT
U12 Branch Point Sequence:
ACTCCTACAATT
Flanking Amino Acid:
KSKLQRENGEVSYDGELHKH
Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.9
0.99
0.8
92.6
23.2
Major BPS
65.7
0.39
1
71.3
30.3
Major PPT
72.4
0.51
1
70
40.8
Minor 5ss
47.8
-0.2
2.5
68.3
42.6
Minor BPS
47.5
-0.1
1.8
65
39.7

Associated Gene:

Gene:
PARP8
Ensembl Gene ID:
ENSAPLG00000014372
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026386
16355864 - 16466398
110535