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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1708970_1710600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1708970 - 1710600

Intron Length:

1631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTACGTACA

5'SS Class:

major

3'SS Sequence:

CTTTTCTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TTTCTCTTAAGC

Flanking Amino Acid:

RGRGGSRGREFRAEENGVDN

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

64.7

41.1

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

84.9

0.79

0.7

80.1

25.5

Minor 5ss

36.9

-1.5

2.9

43.9

43.4

Minor BPS

70.2

0.61

1.6

79.35

35.8

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017199

1699583 - 1812518

112936

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029