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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1710679_1726392_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1710679 - 1726392

Intron Length:

15714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

CAAATTGTAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CTTCCCCAAATT

Flanking Amino Acid:

SDRGKRGRGRGAWKNSIEEW

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

56.4

0.14

50.8

42.2

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

50.5

0.09

73.93

43.1

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017199

1699583 - 1812518

112936

ENSAPLT00000016704

1699583 - 1812518

112936