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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17169587_17172193_R

Intron Information:

Intron Rank:

139514

Intron Class:

major

Intron Phase:

Intron Coordinates:

17169587 - 17172193

Intron Length:

2607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAGAAA

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CTATGAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

35.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

89.3

0.88

0.7

84.5

30.4

Minor 5ss

31.1

-2.2

3.2

35.8

43.1

Minor BPS

43.5

-0.4

2.5

65.41

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021650

17157155 - 17172267

15113