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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1718814_1719986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1718814 - 1719986

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CATTTCTTAACT

Flanking Amino Acid:

GAGRFSAQGMGTFNPADYTE

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.1

0.39

57.2

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

82.2

1.09

1.1

88.69

36.1

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040637

1699583 - 1812611

113029

ENSAPLT00000006718

1699583 - 1812518

112936