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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1736687_1737198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1736687 - 1737198

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

TTCCCGTTTAAG

Flanking Amino Acid:

PKRRITPASKIPASAVEMPG

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.1

30.9

Major BPS

66.3

0.41

37.5

Major PPT

0.5

1.1

75.5

33.3

Minor 5ss

30.6

-2.2

41.1

45.5

Minor BPS

43.6

-0.6

2.4

54.14

46.3

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029

ENSAPLT00000017199

1699583 - 1812518

112936