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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17448326_17452415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17448326 - 17452415

Intron Length:

4090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

KSVSIMSSIAALLHLVVSSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

85.9

25.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

41.9

-0.9

2.9

58.4

46.2

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163