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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17452537_17455413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17452537 - 17455413

Intron Length:

2877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCAGATAACA

Flanking Amino Acid:

VQQYENEEGKWVLIGSPLVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

84.2

0.77

0.8

78.1

34.6

Minor 5ss

44.3

-0.6

2.9

43.7

Minor BPS

47.5

-0.1

2.4

71.22

40.2

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163