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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17453290_17455413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17453290 - 17455413

Intron Length:

2124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

ATTTCATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCAGATAACA

Flanking Amino Acid:

MVKGLGNLRVLIGSPLVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

84.2

0.77

0.8

78.1

34.6

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

47.5

-0.1

2.4

71.22

40.2

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250