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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17455527_17456494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17455527 - 17456494

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAG

5'SS Class:

strong_major

3'SS Sequence:

AATCTATTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

AAATACTTAACA

Flanking Amino Acid:

QSPCIKLNLPASTSVPNVME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

73.4

37.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

73.3

0.52

0.9

67.1

38.5

Minor 5ss

38.9

-1.2

2.8

47.7

Minor BPS

70.1

0.63

1.4

73.67

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163