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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17456584_17456673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17456584 - 17456673

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AACATTTCAACC

Flanking Amino Acid:

LVTNPKGGFLACGPLYAYKC

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

100

1.24

0.5

100

Major PPT

77.8

0.62

82.8

32.4

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

48.8

-0.1

1.5

54.43

37.4

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163

ENSAPLT00000046394

17453187 - 17498436

45250