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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17457574_17463890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17457574 - 17463890

Intron Length:

6317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTATGAATG

Flanking Amino Acid:

NMDIGPQQTQVGIVQYGQTV

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.2

0.52

69.2

46.1

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

52.4

-0

1.8

62.15

39.7

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163