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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17464040_17467145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17464040 - 17467145

Intron Length:

3106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTTTCTATAAAC

Flanking Amino Acid:

TMTALGIDTAREEAFTEAHG

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

73.8

0.59

1.3

72.8

Major PPT

70.8

0.47

0.8

67.5

34.5

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

60.4

0.31

1.7

72.43

38.5

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163