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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17467297_17469068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17467297 - 17469068

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATACCCTTGACT

Flanking Amino Acid:

DENIQRFAIAILGSYSRGNL

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

34.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

34.9

-1.7

3.3

49.9

46.4

Minor BPS

75.9

0.9

1.1

84.36

35.5

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163