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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17469235_17474153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17469235 - 17474153

Intron Length:

4919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAA

Flanking Amino Acid:

ALGERIFALEATKDQQAASF

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

67.7

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.1

0.59

0.9

73.2

Minor 5ss

38.3

-1.3

50.3

46.3

Minor BPS

68.2

0.57

1.4

76.88

33.6

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163