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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17474228_17475790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17474228 - 17475790

Intron Length:

1563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

TTCTCTGCAAAA

Flanking Amino Acid:

QAGFSAHYSQDWIMLGAVGA

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

62.1

0.27

1.1

64.2

35.8

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

46.9

-0.2

2.2

64.41

42.2

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163