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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17475936_17477136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17475936 - 17477136

Intron Length:

1201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ACATCTTGAATT

Flanking Amino Acid:

EKNEPLAAYLGYTVNSALTP

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

74.6

0.61

65.6

41.4

Major PPT

76.4

0.59

0.8

69.2

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

62.3

0.46

1.4

71.91

39.4

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163