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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17477280_17478598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17477280 - 17478598

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGATTTATACCT

Flanking Amino Acid:

QVLQRLKGEQIGSYFGGVIT

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

89.6

0.89

0.7

85.3

29.1

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

0.01

1.9

69.9

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163