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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17478743_17480193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17478743 - 17480193

Intron Length:

1451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TGTTCCTTCACA

Flanking Amino Acid:

GKVYVYALNKTKFEYQMSLE

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

81.8

0.72

0.8

76.1

32.5

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

75.9

0.81

1.7

84.27

35.8

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163