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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17483752_17483943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17483752 - 17483943

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATTCTCAACT

Flanking Amino Acid:

LKSKEDIFESNLQYWIILDS

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

83.2

0.75

0.8

77.1

30.8

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

69.9

0.7

1.5

82.44

38.3

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163