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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17485597_17486158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17485597 - 17486158

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ACTATTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATATAATAAAAT

Flanking Amino Acid:

SNLPNSISEYIPFTKDCGAK

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.9

40.9

Major BPS

0.75

78.6

Major PPT

75.8

0.58

69.2

41.1

Minor 5ss

-1.6

45.9

42.4

Minor BPS

45.8

-0.2

2.1

67.33

42.4

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163

ENSAPLT00000046394

17453187 - 17498436

45250