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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17486245_17486449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17486245 - 17486449

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

CATTATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CAAAATTTAACA

Flanking Amino Acid:

LNVKASIAGDSSSPFIVKSR

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

82.6

0.73

0.9

76.1

37.3

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

53.6

0.11

1.6

59.29

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163