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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17486586_17487475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17486586 - 17487475

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTGTTATAATT

Flanking Amino Acid:

SPNIIFAGIEDIQKDSCESN

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

85.6

0.8

0.7

84.6

30.4

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

55.1

0.24

1.6

74.24

37.2

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163