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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1748669_1806251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1748669 - 1806251

Intron Length:

57583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTATGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTGTTAATAAAT

Flanking Amino Acid:

LQMLQSRLPMDYYGITFPAP

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

84.4

0.85

34.5

Major PPT

65.3

0.35

1.1

67.9

41.8

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

47.1

-0.1

66.93

43.4

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017199

1699583 - 1812518

112936

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029