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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17487557_17489505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17487557 - 17489505

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTTTTTAAAAT

Flanking Amino Acid:

GYPFLKTAEEISFKISFQFN

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.5

0.55

0.9

70.9

33.7

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

53.5

0.19

1.7

70.46

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163

ENSAPLT00000046394

17453187 - 17498436

45250