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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17489583_17490431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17489583 - 17490431

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

ENATVDVYATSDSEEPPETL

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

74.3

37.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.7

0.76

0.8

82.4

Minor 5ss

36.9

-1.5

2.6

45.1

42.8

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163