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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17491818_17492773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17491818 - 17492773

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TGTTTCTTATAG

Flanking Amino Acid:

IGDEVTLHYRIEKGEHFPMP

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

40.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.79

0.7

80.8

31.3

Minor 5ss

31.8

-2.1

3.1

34.5

41.3

Minor BPS

57.6

0.1

1.8

65.12

42.5

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163

ENSAPLT00000046394

17453187 - 17498436

45250