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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17492888_17494532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17492888 - 17494532

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TTTCTGCTAACA

Flanking Amino Acid:

LYLTALSHSQNAICRSSYPV

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

78.1

0.63

0.9

73.6

35.7

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

49.6

-0

2.3

73.2

38.4

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163