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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17496181_17497531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17496181 - 17497531

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAACA

5'SS Class:

strong_major

3'SS Sequence:

GAACACTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACATTCTGAACA

Flanking Amino Acid:

ILRNDHQKLETMIKISKELP

Intron Amino Acid Position:

1127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

76.3

32.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

62.7

0.29

54.9

40.5

Minor 5ss

33.8

-1.8

2.8

44.2

Minor BPS

63.2

0.41

1.4

67.28

38.8

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013907

17448274 - 17498436

50163

ENSAPLT00000046394

17453187 - 17498436

45250