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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17497649_17498391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17497649 - 17498391

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AGTTCTTTATTC

Flanking Amino Acid:

LALLIFALWKAGFFKRPLKK

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

62.7

0.38

1.5

69.24

36.5

Associated Gene:

Gene:

ITGA1

Ensembl Gene ID:

ENSAPLG00000013272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046394

17453187 - 17498436

45250

ENSAPLT00000013907

17448274 - 17498436

50163